Projects
Platforms, data standards, and open-source work spanning biomedical data, neuroscience, and knowledge representation.
COMPASS — Target Discovery & Validation Platform
A data platform at Maze Therapeutics for target discovery and validation, translating human genetics into precision medicines.
Bridge Analytics Environment (BAE)
A shared data and analysis platform supporting open, collaborative research across central-nervous-system conditions.
LOKF — Linked Open Knowledge Format
A semantic profile of Google's Open Knowledge Format that turns a directory of markdown files into a queryable knowledge graph. This website is its reference implementation.
National Consortium on Alcohol and Neurodevelopment in Adolescence (NCANDA)
A multi-site longitudinal study of adolescent brain development and substance use, for which I built the data-integration and informatics framework.
Neuroimaging Data Model (NIDM)
An open data-exchange standard that uses semantic-web technology to describe and share neuroimaging data, analysis provenance, and statistical results.
Neuroanatomical Domain of the Foundational Model of Anatomy Ontology
An extension of the Foundational Model of Anatomy (FMA) ontology to represent neuroanatomy and white-matter connectivity in the human brain.
GREX: Meaningful Metadata at Scale
A system for recording, tracking, storing, finding, and retrieving computational results with rich, reusable metadata.